Identification of Criticality in Neuronal Avalanches: I. A Theoretical Investigation of the Non-driven Case
© T.J. Taylor et al.; licensee Springer 2013
Received: 31 October 2012
Accepted: 8 April 2013
Published: 23 April 2013
In this paper, we study a simple model of a purely excitatory neural network that, by construction, operates at a critical point. This model allows us to consider various markers of criticality and illustrate how they should perform in a finite-size system. By calculating the exact distribution of avalanche sizes, we are able to show that, over a limited range of avalanche sizes which we precisely identify, the distribution has scale free properties but is not a power law. This suggests that it would be inappropriate to dismiss a system as not being critical purely based on an inability to rigorously fit a power law distribution as has been recently advocated. In assessing whether a system, especially a finite-size one, is critical it is thus important to consider other possible markers. We illustrate one of these by showing the divergence of susceptibility as the critical point of the system is approached. Finally, we provide evidence that power laws may underlie other observables of the system that may be more amenable to robust experimental assessment.
A number of in vitro and in vivo studies [1–4] have shown neuronal avalanches—cascades of neuronal firing—that may exhibit power law statistics in the relationship between avalanche size and occurrence. This has been used as prima facie evidence that the brain may be operating near, or at, criticality [5, 6]. In turn, these results have generated considerable interest because a brain at or near criticality would have maximum dynamic range [7–10] enabling it to optimally react and adapt to the dynamics of the surrounding environment [5, 11] whilst maintaining balanced neuronal activity [12–14]. Neuropathological states (e.g., epileptic seizures) could then be conceptualised as a breakdown of, or deviation from, the critical state; see , for example. Furthermore, these findings have led to the notion that the brain may self-organise to a critical state , i.e., its dynamics would be driven toward the critical regime by some intrinsic mechanism and not be dependent on external tuning. In support of this view, Levina and colleagues  showed analytically and numerically that activity-dependent depressive synapses could lead to parameter-independent criticality.
The interpretation that neuronal activity is poised at a critical state appears to be mostly phenomenological whereby an analogy has been developed between the propagation of spikes in a neuronal network and models of percolation dynamics  or branching processes [19, 20]. Remarkable qualitative similarities between the statistical properties of neuronal activity and the above models have given credence to this analogy, however, the question remains as to whether it is justified. Indeed, various key assumptions underlying percolation dynamics and branching processes are typically violated in the neuroscience domain. For example, full sampling, which is required in order to assess self-organised criticality, is unattainable even in the most simple in vitro scenario and yet it has been shown that sub-sampling can have profound effects on the distribution of the resulting observations . On a related note, and more generally, the formal definition of a critical system as one operating at, or near, a second-order (continuous) phase transition is problematic since the concept of phase transition applies to systems with infinite degrees of freedom . Many neuroscience authors address this by appealing to the concept of finite size scaling and many published reports implicitly assume that distributions are power law with truncation to account for the so-called finite size effect. Typically, such reports adopt an approach whereby (a) scale invariance is assessed through finite size scaling analysis, confirming that upon rescaling the event size, the curves collapse to a power law with truncation at system size (but see below regarding the definition of system size); (b) the parameters of statistical models are estimated, typically over a range of event size values that are rarely justified; and (c) the best model is determined by model selection, in which power law and exponentially truncated power law are compared to alternatives such as exponential, lognormal and gamma distributions; see  for a typical example. Whilst greater rigour in the statistical treatment of the assessment of the presence of power laws has been attained following Clauset and colleagues’ influential paper , what seems to be lacking is a rigorous treatment as to why a power law should be assumed to begin with. Although this question is particularly pertinent to the neurosciences, it should be noted that similar questions remain open in the field of percolation theory (e.g., [25, 26]), namely: (i) how does the critical transition behaviour emerge from the behaviour of large finite systems and what are the features of the transition? (ii) what is the location of the scaling window in which to determine the critical parameters?
Assuming that the whole brain, or indeed a region of interest defined by where data can be obtained, is operating at criticality, can we reasonably expect power law statistics in neural data coming from a very small (possibly sub-sampled) subset of the system? If not, what would be the expected distribution? Sornette  states that the Gamma distribution is “found in critical phenomena in the presence of a finite size effect or at a finite distance from the critical point.” Jensen  claims that finite-size systems often show an exponential cut-off below the system size. However, we are not aware of any study in which the distribution of event sizes in a finite-size system set to operate at a critical regime has been investigated.
In a finite-size system, is it reasonable/possible to perform a robust statistical assessment of power law statistics? Even the application of a rigorous model selection approach will lead to different results depending on the choice of the range of event sizes and the number of samples being considered . The issue of range selection is of particular interest. Whilst the notion of system size is clear in models of criticality such as the Abelian sandpile where (i) there is full sampling, (ii) the number of sites is finite, and (iii) there is dissipation at the edges, system size is much less obvious where re-entrant connections exist, making it possible, in principle, for avalanches to be of infinite size. Here, the counting measure which leads to the definition of an avalanche is important. Counting the number of neurones involved in an avalanche will lead to a clearly defined system size, whereas counting the total number of activations—the de facto standard, e.g., [12, 17, 30]—will not. Furthermore, it should also be noted that the presence of re-entrant connections invalidates the standard theory of branching processes , and makes a rigorous determination of the branching parameter σ problematic if not impossible, e.g., in the presence of avalanches merging.
Are there other markers of criticality that may be more amenable to characterisation and that should be considered instead of, or in addition to, the statistics of event sizes? The need for such markers in neuroscience has been recognised (see  for example) and a number of studies have investigated long-range temporal correlations (power-law decay of the autocorrelation function) in amplitude fluctuations  and in inter-burst intervals [32, 33]. However, a theoretical account of how those may relate to one another is lacking (although see the recent work in ). Other markers of criticality (or markers of transitions) have been associated with critical physical systems, e.g., divergence of susceptibility and slowing of the recovery from perturbations near the critical point , however, we are not aware of any theoretical or empirical study investigating them in a neuroscience context.
One way to address these questions more rigorously is to use simplified, but therefore more tractable conceptual models (e.g., ). In this paper, we use a model of a purely excitatory neuronal system with simple stochastic neuronal dynamics that can be tuned to operate at, or near, a second-order phase transition (specifically, a transcritical bifurcation). The simplicity of the model allows us to analytically calculate the exact distribution of avalanche sizes, which we confirm through simulations of the system’s dynamics. We study our model at the critical point and compare our exact distribution to the explicit but approximate solution proposed by Kessler  in an analogous problem of modelling disease dynamics. We confirm that Kessler’s approximate solution converges to our exact result. Importantly, we show that, in the proposed finite-size system, this distribution is not a power law, thus highlighting the necessity of considering other markers of criticality. We thus analyse two potential markers of criticality: (i) the divergence of susceptibility that arises in the model as we approach the critical point, (ii) the slowing down of the recovery time from small disturbances as the system approaches the critical point. Finally, we speculate on a sufficient but not necessary condition under which our exact distribution could converge to a true power law in the limit of the system size.
2 The Stochastic Model
where is the input to the neurone. Here, f is an activation function, is an optional external input, is the connection strength from neurone i to neurone j, and if neurone j is active at time t and zero otherwise. α is the de-activation rate and, therefore, controls the refractory period of the neurone.
We assume that all synaptic weightings are equal ().
We assume there is no external input. The driven case will be explored theoretically and empirically in a companion manuscript.
We assume the linear identity activation function . Although it is more common to use sigmoid activation functions, we note that the identity function can just be thought of as a suitably scaled tanh function over the desired range.
2.1 Firing Neurones and Avalanches
Instead of focussing on the average activity level across the network, we will instead look at the size distribution of firing neurones following one firing event. To do this, we begin with a fully quiescent network and initially activate just one neurone. We then record the total number of neurones that fire (the number of quiescent to active transitions) until the network returns to the fully quiescent state. We use this process of sequential activation as our definition of an avalanche and our main interest is the distribution of the avalanche sizes. Unfortunately, the simple ODE approach will not provide us with this distribution. To calculate this distribution, we use the semi-analytic approach described in the following section.
2.2 Tree Approach to the Avalanche Distribution
with and .
On the j th level of the tree, the probability of only 1 neurone being active is given by . As on level 0, we began with only a single active neurone then for j odd, is always equal to zero. For j even, say , then as we began with only one active neurone on level 0, to have only one active neurone on level j means that k firings must have occurred. We can then calculate the probability of zero active neurones after k firings as ; this is thus the probability, , of having an avalanche of size (or size k if we were not to include the initial active neurone). Setting and noting that we have . To calculate the distribution, we implemented this recursive method of calculation in the MATLAB® environment. Whilst this result is exact, and will be referred to as such henceforth, it can only be calculated numerically via recursion and cannot be given in the form of a closed expression.
2.3 Simulations of Neuronal Avalanches
In order to check the validity of our method, we performed simulations of the firing neurones using the Gillespie algorithm . Due to the network being fully connected the algorithm is relatively straightforward:
As earlier, let A be the number of active neurones in the network (Q the number of quiescent). Given that an individual neurone becomes quiescent at rate α then the total rate of (Active → Quiescent) transitions is given by . Similarly, the total rate of (Quiescent → Active) transitions is given by .
Let and generate a timestep dt from an exponential distribution of rate r.
Generate a random number n between 0 and 1. If an active neurone turns quiescent, otherwise a quiescent neurone is activated (fires). This event is said to occur at time and the network is updated accordingly.
2.4 Exact Solution Compared to Simulation
2.5 Comparing the Exact Solution to a Closed Form Approximation
3 Scale-Free Behaviour in the Regime
4 Origin of the Distribution’s Truncation
The fact that we have an exact form for the distribution allows us to make further important observations about some of its characteristics. Here, we explore the origin of the distribution’s truncation. Let be the eigenvalues of A with the corresponding eigenvectors . The initial condition can then be given as . As the matrix A is similar to a symmetric tridiagonal matrix with real entries (consider the diagonal similarity transformation matrix D, with and ), we know that its eigenvalues are real.
where is the probability that the next transition is a recovery (from A to Q) given 1 active neurone (as defined earlier), are the eigenvalues of the transition matrix A and are specified by the eigenvectors of the transition matrix and the initial conditions. We note that the earlier equation, , can be solved to obtain . Using this, we can then calculate as the first entry of the vector . Equation (3), which is exact, thus demonstrates that the distribution of avalanche sizes is a linear combination of exponentials.
the eigenvalues are well approximated by a geometric distribution, i.e., they are in the form ,
the constants, , are well approximated by ,
where D is an operator such that . For a fixed integer value of q, an approximation for can be obtained by simply applying the operator as many times as necessary and then substituting . For , for example, which for small values of μ is well approximated by .
It is worth noting that this result is consistent with that obtained for integer values of q.
5 Other Markers of Criticality
Since the distribution of avalanche sizes in the finite-size critical system does not necessarily follow a true power law, the application of robust statistical testing in experimental conditions could well lead to rejecting the hypothesis that the data may come from a system operating in the critical regime. Therefore, in this section, we consider two experimentally testable markers of criticality: critical slowing down and divergence of susceptibility. We will define those concepts below but first we briefly summarise Van Kampen’s system size expansion , which we use to illustrate those markers on our system.
5.1 System Size Expansion
We make use of these equations in the following two sections.
5.1.1 Critical Slowing Down
The solution to this depends on whether or ( and , respectively). If , then as , . If then as , . Note that in both cases, convergence of the number of active neurones to the steady state solution is exponential.
Thus, as we find . However, unlike for , convergence to the steady state exhibits a power law dependence on time .
5.1.2 Divergence of Susceptibility
Here, it should be noted that any finite-size network has a zero absorbing state so that eventually all activity will die out irrespective of the value of . However, it has been shown that the ODE limit is a valid approximation to the solution of the master equation for reasonably sized systems with values of greater than 1 and only over a finite time horizon (see  for further discussion). Defining the true (i.e., calculated directly from the master equation for ) expected value of active neurones at time t as , the convergence of the ODE approximation for given by Eq. (13) is such that for any .
Over the last decade or so, the search for evidence that the brain may be a critical system has been the focus of much research. This is because it is thought that a critical brain would benefit from maximised dynamic range of processing, fidelity of information transmission and information capacity . Whilst support for the critical brain hypothesis has emerged from comparing brain dynamics at various scales with the dynamics of physical systems at criticality (e.g., [31, 34, 47–50]), in this paper, we focus on the important body of work that has relied on characterising power laws in the distributions of size of neuronal avalanches [8, 30]. Our focus on this scale is motivated by empirical considerations regarding how one can go about demonstrating the above functional properties. Shew and Plenz  remark that any research strategy to test whether these properties are optimal near criticality will have to achieve two criteria: a means of altering the overall balance of interactions between neurones and a means of assessing how close to criticality the cortex is operating. As argued by these authors, the study of neuronal avalanches offers the greatest likelihood of achieving those two criteria.
The importance of a robust assessment of the statistical properties of the avalanche size is therefore two-fold: on the one hand, it is about ascertaining the extent to which the system being studied has the statistical properties expected of a system operating at, or near, criticality; on the other hand, it is about being able to confirm that a manipulation/perturbation of the system aimed to push the system away from this critical regime has been effective. This consideration therefore puts a lot of importance on the description of the statistics one should expect in such a system. In the current literature, the assumption of the distribution of avalanche sizes taking a power law functional form relies on an analogy between the propagation of spikes in a neuronal network and models of percolation dynamics or branching processes for which exact power laws have been demonstrated in the limit of system size. As a result of the importance of having a robust assessment of the expected presence of a power law, greater emphasis has recently been put on using a sound statistical testing framework, e.g., . Whilst we are unaware of any study in which the criticality hypothesis was rejected due to failure of rigorous statistical testing (which we suspect is due to the necessarily small number of observations, as we will argue below), there is clear evidence that many authors are now using the methods of Clauset et al.  to confirm the criticality of their experimental findings, e.g., [12, 23, 29]. As a result, we feel that it is all the more important to confirm that the assumed power law functional form is indeed a sensible representation of what one should expect in in vivo and in vitro recordings, which, unlike the physical systems considered when deriving the power law statistics, are finite-size systems. The aim of the paper was therefore to consider a model of neuronal dynamics that would be simple enough to allow the derivation of analytical or semi-analytical results whilst (i) giving us a handle on the parameter controlling the fundamental principle thought to underlie criticality in the brain, namely, the balancing between processes that enhance and suppress activity (note that we are intentionally not referring to excitation and/or inhibition—we will return to this below) and (ii) allowing us to determine its distribution of avalanche sizes when operating in the critical regime. Note that because we are using a finite-size system, we are appealing to a normal form of standard bifurcation, here, a transcritical bifurcation, because it embodies all that needs to be known about the ‘critical’ transition (Sornette, private communication).
Our semi-analytic derivation of the true distribution of avalanche sizes in a finite-size system suggests that, even though it is approximately scale free over a limited range, the distribution is not a true power law. First, this has important implications for the interpretation of results from a robust statistical assessment of the distribution. Indeed, as has been discussed by Klaus and Plenz , with a large number of samples, any distribution that deviates from the expected distribution by more than noise due to sampling, will eventually yield a p-value such that the power law hypothesis will be rejected, thus leading to the potentially incorrect conclusion that the system is not critical. This is the case in our scenario where using 106 avalanches lead to a rejection of the criticality hypothesis even though the system is tuned to the critical regime. In contrast, with 105 avalanches (which is consistent with empirical observations), a p-value above threshold leads to not rejecting the hypothesis that the distribution is a power law even though we established it is not one.1 This finding therefore provides an important counterpart to the analytical results of Touboul and colleagues  who showed that thresholded stochastic processes could generically yield apparent power laws that only stringent statistical testing will reject. Whilst the stringent testing will reject the hypothesis of criticality for a system that is not necessarily critical, it may also reject the hypothesis of criticality for a system that is critical only because the actual distribution is not actually a power law. This ambiguity of the avalanche distribution in the finite-size system therefore requires that one should carefully consider to what fundamental property the idea of a critical brain actually appeals to. We suggest that the key appeal is that the brain can exhibit long-range correlations between neurones without it ever experiencing an over saturation of activity or long periods of inactivity. It then follows that the importance is not in the exact distribution obtained but in the approximately scale-free behaviour it exhibits. In turn, this highlights the importance of looking at other markers of criticality (which we will discuss below).
Another important result of this work is to provide the beginning of a mechanistic explanation for an often alluded to (e.g., ) but never properly treated (as far as we are aware) observation that whereas avalanches in a critical system with re-entrant connections could in principle be arbitrarily long, and certainly, exceeding the number of recording sites, neuronal avalanches in in vitro or in vivo systems (and many computational models of self-organised criticality) often show a cut-off at the number of sites. Our work suggests that the lead eigenvalue of the transition matrix between states fully determine the location of this cut-off, which turns out indeed to be at about the system size, even if avalanches of up to 20 times the system size can be observed. This finding therefore provides some justification for setting, or accepting, a bound within which to apply a Clauset-type methodology (we note that various reports use different ranges, e.g., 80 % of system size in , roughly system size in ). It is worth remembering that the number of recording sites can have profound implications on the nature of the distribution observed .
In addition to providing results on the distribution of avalanche sizes, we also sought to explore other potential markers of criticality. We provided results on two other markers of criticality—critical slowing down and divergence of susceptibility—both of which again follow from a dynamical systems appreciation of a critical bifurcation, i.e., the behaviour of a system whose lead eigenvalue crosses zero. The appeal of those markers, which have been documented in many other natural processes, e.g., [42, 52], but seldom at the mesoscopic brain level2 (see  for a rare example) is that (a) they strengthen the assessment of the system being critical and (b) may contribute to achieving the second criterion of Shew and Plenz . Although the authors are not in a position to provide explicit recommendations for an experimental design, we believe that these markers are amenable to robust experimentation, e.g., through pharmacological manipulation.
Whilst we hope we have convinced the reader of the potential importance of these findings, we also need to recognise that the very simplicity that makes analytical work possible does also raise questions regarding how physiologically plausible such a model is and, therefore, whether its conclusions should be expected to hold. Below, we address a few of the points worthy of further consideration.
6.1 Validity of Inferring Criticality in a Finite Network
6.2 Validity of a Purely Excitatory Network
In this paper, we have used a purely excitatory neuronal model. This not only simplifies the system but is also an important characteristic of the brain during early development. Experimental results have shown that during early development, before birth, GABAergic neurones (i.e., neurones which will later be inhibitory) have a depolarising effect on their post-synaptic neighbours [56–58]. Thus, our model might be considered as representative of early development. Power law statistics have been observed in early development at a time when networks are thought to be purely excitatory [32, 59]. It should be noted that this approach has the benefit of casting a new light on the question of what is the minimum requirement for a neuronal system to show criticality. To a large extent, the current literature has been focused on a form of homeostasis resulting from either a fine balance between excitation and inhibition, e.g., [12, 13] or some relatively complex dynamical processes at synaptic level, e.g., . Our results show that a purely excitatory system can show the exact same behaviour such that on average each active neurone only activates one postsynaptic neurone. Here, this balanced state is achieved through a trade-off between the rates at which neurones become active and quiescent. It should be noted that this formulation of the problem leads to interesting parallels with classical models of mathematical epidemiology, which the authors intend to continue exploring.
6.3 Spatial Structure
To make use of the analytic tractability of the mean field equation it was necessary to consider a fully connected network. While this is not true of the whole brain, it may be closer to the reality of the kind of in vitro systems typically considered in studies of neuronal avalanches. For example, Hellwig et al.  report up to 80 % connection probability in local connectivity between pyramidal neurones in layers 2/3 of the rat visual cortex. Extending the work presented here to consider the effect of network topology on the system’s dynamics and the resulting distribution of event sizes would be of particular interest from a developmental viewpoint (see, for instance, Larremore et al. , who have considered the avalanche distribution of general tree-like networks with discrete dynamics). As networks mature, there is not only a switch to inhibition by a proportion of the neurones (the so-called GABA switch), but also a subsequent pruning of synaptic connections . The level of pruning is high, with a 40 % reduction in the number of synaptic connections between early childhood and adulthood . Thus, a developing network may be more readily approximated by a fully connected network than an adult neural network would be.
The lack of a spatial embedding of our model is in contrast with many classical models of criticality, and also with physiological systems. Accordingly, our model cannot display another important marker of criticality, namely, the divergence of correlation lengths in space. A spatial embedding is not needed for our system to be critical and to exhibit a distribution of avalanche size similar to that observed in physiological neuronal avalanches. It therefore begs the question of the exact role of spatial embedding in the dynamics of neuronal avalanches. It may well be that, just like balanced activity in our model comes about from a trade-off between excitation and refractoriness rather than between excitation and inhibition, specific spatial embeddings may enable balanced activity without the need for plastic mechanisms. Kaiser and Hilgetag  showed that hierarchical modular networks can lead to limited sustained activity whereby the activity of neural populations in the network persists between the extremes of either quickly dying out or activating the whole network. Roxin and colleagues  observed self-sustained activity in excitable integrate-and-fire neurones in a small-world network, whose dynamics depends sensitively on the propagation velocity of the excitation.
6.4 Non-driven Case
Finally, in this paper, we have focused on the non-driven case . Whilst this constraint allowed the derivation of analytical results, it obviously contrasts with the reality of a physiological system unless one considers that any ‘external’ input operates at such a slower timescale that one could assume separation of time scales (an important assumption in the self-organised criticality framework). However, the fact that binning is required for identifying avalanches in physiological recordings suggests that this separation of time scales is unlikely. Whilst the introduction of a non-zero h in our model does not affect the results obtained using finite size expansion, it does effectively make it impossible for the system to operate at . A thorough investigation of the driven case () will be the subject of the companion paper.
As the power law is not a sufficient condition of criticality, one should not infer from this that the system is indeed critical, however, this step is commonly taken in published reports and that is worth mentioning here.
Strictly speaking the notion of critical slowing in neurones firing near firing threshold appeals to the same notion.
Timothy Taylor is funded by a PGR studentship from MRC, and the Departments of Informatics and Mathematics at University of Sussex. Caroline Hartley is funded through CoMPLEX (Centre for Mathematics and Physics in the Life Sciences and Experimental Biology), University College London. Istvan Z. Kiss acknowledges support from EPSRC (EP/H001085/1). Péter L. Simon acknowledges support from OTKA (grant no. 81403) and from the European Union and the European Social Fund (financial support to the project under the grant agreement no. TÁMOP-4.2.1/B-09/1/KMR).
- Beggs JM, Plenz D: Neuronal avalanches in neocortical circuits. J Neurosci 2003, 23(35):11167–11177.Google Scholar
- Beggs JM, Plenz D: Neuronal avalanches are diverse and precise activity patterns that are stable for many hours in cortical slice cultures. J Neurosci 2004, 24(22):5216–5229. 10.1523/JNEUROSCI.0540-04.2004View ArticleGoogle Scholar
- Petermann T, Thiagarajan TC, Lebedev MA, Nicolelis MAL, Chialvo DR, Plenz D: Spontaneous cortical activity in awake monkeys composed of neuronal avalanches. Proc Natl Acad Sci USA 2009, 106(37):15921–15926. 10.1073/pnas.0904089106View ArticleGoogle Scholar
- Hahn G, Petermann T, Havenith MN, Yu S, Singer W, Plenz D, Nikolic D: Neuronal avalanches in spontaneous activity in vivo. J Neurophysiol 2010, 104(6):3312–3322. 10.1152/jn.00953.2009View ArticleGoogle Scholar
- Chialvo DR: Emergent complex neural dynamics. Nat Phys 2010, 6(10):744–750. 10.1038/nphys1803View ArticleGoogle Scholar
- Sethna JP, Dahmen KA, Myers CR: Crackling noise. Nature 2001, 410(6825):242–250. 10.1038/35065675View ArticleGoogle Scholar
- Kinouchi O, Copelli M: Optimal dynamical range of excitable networks at criticality. Nat Phys 2006, 2(5):348–352. 10.1038/nphys289View ArticleGoogle Scholar
- Shew WL, Yang H, Petermann T, Roy R, Plenz D: Neuronal avalanches imply maximum dynamic range in cortical networks at criticality. J Neurosci 2009, 29(49):15595–15600. 10.1523/JNEUROSCI.3864-09.2009View ArticleGoogle Scholar
- Buckley CL, Nowotny T: Multiscale model of an inhibitory network shows optimal properties near bifurcation. Phys Rev Lett 2011., 106(23): Article ID 238109 Article ID 238109Google Scholar
- Larremore DB, Shew WL, Restrepo JG: Predicting criticality and dynamic range in complex networks: effects of topology. Phys Rev Lett 2011., 106: Article ID 058101 Article ID 058101Google Scholar
- Linkenkaer-Hansen K, Nikouline VV, Palva JM, Ilmoniemi RJ: Long-range temporal correlations and scaling behavior in human brain oscillations. J Neurosci 2001, 21(4):1370–1377.Google Scholar
- Benayoun M, Cowan JD, van Drongelen W, Wallace E: Avalanches in a stochastic model of spiking neurons. PLoS Comput Biol 2010., 6(7): Article ID e1000846 Article ID e1000846Google Scholar
- Magnasco MO, Piro O, Cecchi GA: Self-tuned critical anti-Hebbian networks. Phys Rev Lett 2009., 102(25): Article ID 258102 Article ID 258102Google Scholar
- Meisel C, Storch A, Hallmeyer-Elgner S, Bullmore E, Gross T: Failure of adaptive self-organized criticality during epileptic seizure attacks. PLoS Comput Biol 2012., 8: Article ID e1002312 Article ID e1002312Google Scholar
- Milton JG: Neuronal avalanches, epileptic quakes and other transient forms of neurodynamics. Eur J Neurosci 2012, 36(2):2156–2163. 10.1111/j.1460-9568.2012.08102.xMathSciNetView ArticleGoogle Scholar
- Bak P, Tang C, Wiesenfeld K: Self-organized criticality: an explanation of the 1/ f noise. Phys Rev Lett 1987, 59(4):381–384. 10.1103/PhysRevLett.59.381MathSciNetView ArticleGoogle Scholar
- Levina A, Herrmann JM, Geisel T: Dynamical synapses causing self-organized criticality in neural networks. Nat Phys 2007, 3: 857–860. 10.1038/nphys758View ArticleGoogle Scholar
- Essam JW: Percolation theory. Rep Prog Phys 1980, 43: 833–912. 10.1088/0034-4885/43/7/001MathSciNetView ArticleGoogle Scholar
- Beggs JM: Neuronal avalanche. Scholarpedia 2006., 2: Article ID 1344 Article ID 1344Google Scholar
- Harris TE: The Theory of Branching Processes. Springer, Berlin; 1963.View ArticleGoogle Scholar
- Priesemann V, Munk MHJ, Wibral M: Subsampling effects in neuronal avalanche distributions recorded in vivo. BMC Neurosci 2009., 10: Article ID 40 Article ID 40Google Scholar
- Deco G, Senden M, Jirsa V: How anatomy shapes dynamics: a semi-analytical study of the brain at rest by a simple spin model. Front Comput Neurosci 2012., 6: Article ID 68 Article ID 68Google Scholar
- Klaus A, Yu S, Plenz D: Statistical analyses support power law distributions found in neuronal avalanches. PLoS ONE 2011., 6(5): Article ID e19779 Article ID e19779
- Clauset A, Shalizi CR, Newman MEJ: Power-law distributions in empirical data. SIAM Rev 2009, 51(4):661–703. 10.1137/070710111MathSciNetView ArticleGoogle Scholar
- Ziff RM: Correction-to-scaling exponent for two-dimensional percolation. Phys Rev E 2011., 83: Article ID 020107 Article ID 020107Google Scholar
- Borgs C, Chayes JT, Kesten H, Spencer J: The birth of the infinite cluster: finite-size scaling in percolation. Commun Math Phys 2001, 224: 153–204. 10.1007/s002200100521MathSciNetView ArticleGoogle Scholar
- Sornette D: Critical Phenomena in Natural Sciences. 2nd edition. Springer, Berlin; 2006.Google Scholar
- Jensen H: Self-organized Criticality: Emergent Complex Behavior in Physical and Biological Systems. Cambridge University Press, Cambridge; 1998.View ArticleGoogle Scholar
- Touboul J, Destexhe A: Can power-law scaling and neuronal avalanches arise from stochastic dynamics? PLoS ONE 2010., 5(2): Article ID e8982 Article ID e8982
- Beggs JM, Plenz D: Neuronal avalanches in neocortical circuits. J Neurosci 2003, 23(35):11167–11177.Google Scholar
- Linkenkaer-Hansen K, Nikouline VV, Palva JM, Ilmoniemi RJ: Long-range temporal correlations and scaling behavior in human brain oscillations. J Neurosci 2001, 21(4):1370–1377.Google Scholar
- Hartley C, Berthouze L, Mathieson SR, Boylan GB, Rennie JM, Marlow N, Farmer SF: Long-range temporal correlations in the EEG bursts of human preterm babies. PLoS ONE 2012., 7(2): Article ID e31543 Article ID e31543Google Scholar
- Segev R, Benveniste M, Hulata E, Cohen N, Palevski A, Kapon E, Shapira Y, Ben-Jacob E: Long term behavior of lithographically prepared in vitro neuronal networks. Phys Rev Lett 2002., 88(11): Article ID 118102 Article ID 118102Google Scholar
- Poil SS, Hardstone R, Mansvelder HD, Linkenkaer-Hansen K: Critical-state dynamics of avalanches and oscillations jointly emerge from balanced excitation/inhibition in neuronal networks. J Neurosci 2012, 32(29):9817–9823. 10.1523/JNEUROSCI.5990-11.2012View ArticleGoogle Scholar
- Droste F, Do AL, Gross T: Analytical investigation of self-organized criticality in neural networks. J R Soc Interface 2012., 10(78): Article ID 20120558 Article ID 20120558Google Scholar
- Kessler DA: Epidemic size in the SIS model of endemic infections. J Appl Probab 2008, 45(3):757–778. 10.1239/jap/1222441828MathSciNetView ArticleGoogle Scholar
- Allen LJ: Introduction to stochastic epidemic models. Lecture Notes in Mathematics 1945. In Mathematical Epidemiology. Springer, Berlin; 2008:81–130.View ArticleGoogle Scholar
- Gillespie DT: Exact stochastic simulation of coupled chemical reactions. J Phys Chem 1977, 81(25):2340–2361. 10.1021/j100540a008View ArticleGoogle Scholar
- Chialvo R: Critical brain networks. Physica A 2004, 340: 756–765. 10.1016/j.physa.2004.05.064View ArticleGoogle Scholar
- Van Kampen NG: Stochastic Processes in Physics and Chemistry. 3rd edition. North-Holland, Amsterdam; 2007.Google Scholar
- Wissel C: A universal law of the characteristic return time near thresholds. Oecologia 1984, 65: 101–107. 10.1007/BF00384470View ArticleGoogle Scholar
- Scheffer M, Bascompte J, Brock WA, Brovkin V, Carpenter SR, Dakos V, Held H, van Nes EH, Rietkerk M, Sugihara G: Early-warning signals for critical transitions. Nature 2009, 461(7260):53–59. 10.1038/nature08227View ArticleGoogle Scholar
- Stollenwerk N, Jansen VA: Criticality in epidemiology. World Scientific Lecture Notes in Complex Systems 7. In Complex Population Dynamics: Nonlinear Modelling in Ecology, Epidemiology and Genetics. Edited by: Blasius B, Stone L, Kurths J. World Scientific, Singapore; 2007:159–188.View ArticleGoogle Scholar
- Nåsell I: The quasi-stationary distribution of the closed endemic SIS model. Adv Appl Probab 1996, 28(3):895–932. 10.2307/1428186View ArticleGoogle Scholar
- Simon P, Taylor M, Kiss I: Exact epidemic models on graphs using graph-automorphism driven lumping. J Math Biol 2011, 62(4):479–508. 10.1007/s00285-010-0344-xMathSciNetView ArticleGoogle Scholar
- Shew WL, Plenz D: The functional benefits of criticality in the cortex. Neuroscientist 2012, 19(1):88–100.View ArticleGoogle Scholar
- Plenz D, Chialvo DR: Scaling properties of neuronal avalanches are consistent with critical dynamics. [arXiv:0912.5369] Plenz D, Chialvo DR: Scaling properties of neuronal avalanches are consistent with critical dynamics. [arXiv:0912.5369]
- Expert P, Lambiotte R, Chialvo DR, Christensen K, Jensen HJJ, Sharp DJ, Turkheimer F: Self-similar correlation function in brain resting-state functional magnetic resonance imaging. J R Soc Interface 2011, 8(57):472–479. 10.1098/rsif.2010.0416View ArticleGoogle Scholar
- Friedman N, Ito S, Brinkman BAW, Shimono M, DeVille REL, Dahmen KA, Beggs JM, Butler TC: Universal critical dynamics in high resolution neuronal avalanche data. Phys Rev Lett 2012., 108: Article ID 208102 Article ID 208102Google Scholar
- Ribeiro TL, Copelli M, Caixeta F, Belchior H, Chialvo DR, Nicolelis MAL, Ribeiro S: Spike avalanches exhibit universal dynamics across the sleep-wake cycle. PLoS ONE 2010., 5(11): Article ID e14129 Article ID e14129Google Scholar
- Rubinov M, Sporns O, Thivierge JP, Breakspear M: Neurobiologically realistic determinants of self-organized criticality in networks of spiking neurons. PLoS Comput Biol 2011., 7(6): Article ID e1002038 Article ID e1002038Google Scholar
- Kelso JAS: Haken–Kelso–Bunz model. Scholarpedia 2008., 3(10): Article ID 1612 Article ID 1612Google Scholar
- Steyn-Ross ML, Steyn-Ross DA, Sleigh JW, Whiting DR: Theoretical predictions for spatial covariance of the electroencephalographic signal during the anesthetic-induced phase transition: increased correlation length and emergence of spatial self-organization. Phys Rev E 2003., 68(2 Pt 1): Article ID 021902 Article ID 021902Google Scholar
- Simon PL, Kiss IZ: From exact stochastic to mean-field ODE models: a new approach to prove convergence results. IMA J Appl Math 2012. doi:10.1093/imamat/hxs001 doi:10.1093/imamat/hxs001Google Scholar
- Ganesh A, Massoulie L, Towsley D: The effect of network topology on the spread of epidemics. INFOCOM 2005. Proceedings of the 24th Annual Joint Conference of the IEEE Computer and Communications Societies. Volume 2 2005, 1455–1466.Google Scholar
- Cherubini E, Gaiarsa JL, Ben-Ari Y: GABA: an excitatory transmitter in early postnatal life. Trends Neurosci 1991, 14(12):515–519. 10.1016/0166-2236(91)90003-DView ArticleGoogle Scholar
- Rivera C, Voipio J, Payne JA, Ruusuvuori E, Lahtinen H, Lamsa K, Pirvola U, Saarma M, Kaila K: The K+/Cl− co-transporter KCC2 renders GABA hyperpolarizing during neuronal maturation. Nature 1999, 397(6716):251–255. 10.1038/16697View ArticleGoogle Scholar
- Ben-Ari Y: Excitatory actions of GABA during development: the nature of the nurture. Nat Rev, Neurosci 2002, 3(9):728–739. 10.1038/nrn920View ArticleGoogle Scholar
- Gireesh ED, Plenz D: Neuronal avalanches organize as nested theta- and beta/gamma-oscillations during development of cortical layer 2/3. Proc Natl Acad Sci USA 2008, 105(21):7576–7581. 10.1073/pnas.0800537105View ArticleGoogle Scholar
- Hellwig B: A quantitative analysis of the local connectivity between pyramidal neurons in layers 2/3 of the rat visual cortex. Biol Cybern 2000, 82(2):111–121. 10.1007/PL00007964View ArticleGoogle Scholar
- Larremore DB, Carpenter MY, Ott E, Restrepo JG: Statistical properties of avalanches in networks. Phys Rev E 2012., 85: Article ID 066131 Article ID 066131Google Scholar
- Huttenlocher PR, Dabholkar AS: Regional differences in synaptogenesis in human cerebral cortex. J Comp Neurol 1997, 387(2):167–178. 10.1002/(SICI)1096-9861(19971020)387:2<167::AID-CNE1>3.0.CO;2-ZView ArticleGoogle Scholar
- Kaiser M, Hilgetag CC: Optimal hierarchical modular topologies for producing limited sustained activation of neural networks. Front Neuroinform 2010., 4: Article ID 8 Article ID 8Google Scholar
- Roxin A, Riecke H, Solla S: Self-sustained activity in a small-world network of excitable neurons. Phys Rev Lett 2004., 92(19): Article ID 198101 Article ID 198101
This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.